1. Biobase::SW
    Class to Contain High-Throughput Assays and Experimental Metadata
  2. Biobase::aaMap
    Dataset: Names and Characteristics of Amino Acids
  3. Biobase::geneCov
    Sample expression matrix and phenotype data.frames.
  4. Biobase::geneCovariate
    Sample expression matrix and phenotype data.frames.
  5. Biobase::geneData
    Sample expression matrix and phenotype data.frames.
    matrix|500 x 26
  6. Biobase::reporter
    Example data.frame representing reporter information
  7. Biobase::sample.ExpressionSet
    Dataset of class 'ExpressionSet'
    ExpressionSet
  8. Biobase::sample.MultiSet
    Data set of class 'MultiSet'
    MultiSet
  9. Biobase::seD
    Sample expression matrix and phenotype data.frames.
    matrix|500 x 26
  10. biocViews::biocViewsVocab
    Bioconductor Task Views Vocabulary Data
    graphNEL
  11. Biostrings::BLOSUM100
    Predefined scoring matrices
    moved_to_pwalign_pkg|24 x 24
  12. Biostrings::BLOSUM45
    Predefined scoring matrices
    moved_to_pwalign_pkg|25 x 25
  13. Biostrings::BLOSUM50
    Predefined scoring matrices
    moved_to_pwalign_pkg|24 x 24
  14. Biostrings::BLOSUM62
    Predefined scoring matrices
    moved_to_pwalign_pkg|25 x 25
  15. Biostrings::BLOSUM80
    Predefined scoring matrices
    moved_to_pwalign_pkg|25 x 25
  16. Biostrings::HNF4alpha
    Known HNF4alpha binding sequences
    DNAStringSet
  17. Biostrings::PAM120
    Predefined scoring matrices
    moved_to_pwalign_pkg|24 x 24
  18. Biostrings::PAM250
    Predefined scoring matrices
    moved_to_pwalign_pkg|24 x 24
  19. Biostrings::PAM30
    Predefined scoring matrices
    moved_to_pwalign_pkg|25 x 25
  20. Biostrings::PAM40
    Predefined scoring matrices
    moved_to_pwalign_pkg|24 x 24
  21. Biostrings::PAM70
    Predefined scoring matrices
    moved_to_pwalign_pkg|25 x 25
  22. Biostrings::yeastSEQCHR1
    An annotation data file for CHR1 in the yeastSEQ package
  23. iNETgrate::toyCleanedAml
    A subset of cleaned TCGA-LAML data
  24. iNETgrate::toyComputEloci
    A subset of weighted DNA methylation profile of TCGA-LAML data
  25. iNETgrate::toyEigengenes
    A subset of weighted average of gene expression present in each module
    matrix|158 x 4
  26. iNETgrate::toyRawAml
    A subset of TCGA-LAML data
  27. pwalign::BLOSUM100
    Predefined scoring matrices
    matrix|24 x 24
  28. pwalign::BLOSUM45
    Predefined scoring matrices
    matrix|25 x 25
  29. pwalign::BLOSUM50
    Predefined scoring matrices
    matrix|24 x 24
  30. pwalign::BLOSUM62
    Predefined scoring matrices
    matrix|25 x 25
  31. pwalign::BLOSUM80
    Predefined scoring matrices
    matrix|25 x 25
  32. pwalign::PAM120
    Predefined scoring matrices
    matrix|24 x 24
  33. pwalign::PAM250
    Predefined scoring matrices
    matrix|24 x 24
  34. pwalign::PAM30
    Predefined scoring matrices
    matrix|25 x 25
  35. pwalign::PAM40
    Predefined scoring matrices
    matrix|24 x 24
  36. pwalign::PAM70
    Predefined scoring matrices
    matrix|25 x 25
  37. pwalign::phiX174Phage
    Versions of bacteriophage phiX174 complete genome and sample short reads
    DNAStringSet
  38. pwalign::quPhiX174
    Versions of bacteriophage phiX174 complete genome and sample short reads
    BStringSet
  39. pwalign::srPhiX174
    Versions of bacteriophage phiX174 complete genome and sample short reads
    DNAStringSet
  40. pwalign::wtPhiX174
    Versions of bacteriophage phiX174 complete genome and sample short reads